Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_110124 | Not Available | - | 7120864 - 7121040 | 6583.99 |
| two component transcriptional regulator, lyttr family | SAMN04488505_110125 | Not Available | - | 7121314 - 7122015 | 26480.6 |
| ghkl domain-containing protein | SAMN04488505_110126 | Not Available | - | 7122012 - 7123019 | 38525.8 |
| hypothetical protein | SAMN04488505_110127 | Not Available | + | 7123236 - 7123700 | 18155.7 |
| transcriptional regulator, gntr family | SAMN04488505_110128 | Not Available | + | 7124244 - 7124993 | 28653.5 |
| glucokinase | SAMN04488505_110129 | Not Available | + | 7125070 - 7125984 | 32347.7 |
| mannose-6-phosphate isomerase, class i | SAMN04488505_110130 | Not Available | + | 7125987 - 7127765 | 67009.8 |
| alpha-1,2-mannosidase, putative | SAMN04488505_110131 | Not Available | + | 7127824 - 7130151 | 86080.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_110132 | Not Available | + | 7130210 - 7133299 | 113638.0 |
| starch-binding associating with outer membrane | SAMN04488505_110133 | Not Available | + | 7133322 - 7134926 | 59331.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.