Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-fucosidase | SAMN04488505_110114 | Not Available | + | 7105375 - 7106685 | 49358.3 |
| sialate o-acetylesterase | SAMN04488505_110115 | Not Available | - | 7106762 - 7108156 | 50945.6 |
| beta-xylosidase | SAMN04488505_110116 | Not Available | - | 7108574 - 7110112 | 58288.2 |
| f5/8 type c domain-containing protein | SAMN04488505_110117 | Not Available | - | 7110204 - 7111637 | 53421.2 |
| enterochelin esterase | SAMN04488505_110118 | Not Available | - | 7111696 - 7112598 | 33621.1 |
| l-rhamnose mutarotase | SAMN04488505_110119 | Not Available | - | 7112624 - 7112959 | 13154.8 |
| d-threo-aldose 1-dehydrogenase | SAMN04488505_110120 | Not Available | - | 7112975 - 7113991 | 37442.7 |
| alpha-l-fucosidase | SAMN04488505_110121 | Not Available | - | 7114149 - 7115798 | 61940.1 |
| glycosyl-hydrolase 97 c-terminal, oligomerisation | SAMN04488505_110122 | Not Available | - | 7115970 - 7117940 | 73772.5 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488505_110123 | Not Available | - | 7118055 - 7120892 | 100033.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.