Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glyoxylase, beta-lactamase superfamily ii | SAMN04488505_11074 | Not Available | - | 7062802 - 7063785 | 36072.6 |
| transcriptional regulator, hxlr family | SAMN04488505_11075 | Not Available | + | 7063898 - 7064260 | 14161.4 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488505_11076 | Not Available | - | 7064257 - 7064922 | 23461.1 |
| predicted ester cyclase | SAMN04488505_11077 | Not Available | - | 7064944 - 7065411 | 17287.7 |
| thiol-disulfide isomerase or thioredoxin | SAMN04488505_11078 | Not Available | - | 7065558 - 7066727 | 43790.6 |
| starch-binding associating with outer membrane | SAMN04488505_11079 | Not Available | - | 7066741 - 7068153 | 52501.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_11080 | Not Available | - | 7068180 - 7071689 | 129506.0 |
| fecr family protein | SAMN04488505_11081 | Not Available | - | 7071902 - 7073017 | 41200.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_11082 | Not Available | + | 7073249 - 7073905 | 25193.9 |
| transcriptional regulator, arac family | SAMN04488505_11083 | Not Available | - | 7073915 - 7074751 | 32191.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.