Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc-type transport system, involved in lipoprotein release, permease component | SAMN04488505_11064 | Not Available | + | 7047875 - 7050283 | 88831.5 |
| hypothetical protein | SAMN04488505_11065 | Not Available | - | 7050303 - 7050833 | 19298.7 |
| atp-binding cassette, subfamily b | SAMN04488505_11066 | Not Available | - | 7050838 - 7053024 | 82603.7 |
| thiopeptide-type bacteriocin biosynthesis domain-containing protein | SAMN04488505_11067 | Not Available | - | 7053024 - 7056152 | 117591.0 |
| lanthionine synthetase c-like protein | SAMN04488505_11068 | Not Available | - | 7056188 - 7057393 | 45633.4 |
| hypothetical protein | SAMN04488505_11069 | Not Available | - | 7057499 - 7057699 | 6981.55 |
| hypothetical protein | SAMN04488505_11070 | Not Available | - | 7057780 - 7057953 | 6375.87 |
| rnase z | SAMN04488505_11071 | Not Available | + | 7058324 - 7059271 | 36355.4 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN04488505_11072 | Not Available | - | 7059268 - 7060011 | 25927.0 |
| uncharacterized protein, contains gba2_n and duf608 domains | SAMN04488505_11073 | Not Available | - | 7060051 - 7062612 | 95699.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.