Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | SAMN04488505_11054 | Not Available | + | 7032569 - 7033495 | 35271.6 |
| glucoamylase (glucan-1,4-alpha-glucosidase), gh15 family | SAMN04488505_11055 | Not Available | - | 7033492 - 7035339 | 71022.8 |
| glucose 1-dehydrogenase | SAMN04488505_11056 | Not Available | + | 7035411 - 7036181 | 27320.6 |
| pectinesterase | SAMN04488505_11057 | Not Available | - | 7036191 - 7037267 | 39989.6 |
| starch-binding associating with outer membrane | SAMN04488505_11058 | Not Available | - | 7037292 - 7039112 | 68940.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_11059 | Not Available | - | 7039135 - 7042311 | 115414.0 |
| fmn-dependent nadh-azoreductase | SAMN04488505_11060 | Not Available | - | 7042656 - 7043255 | 22291.7 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488505_11061 | Not Available | - | 7043361 - 7045760 | 90027.8 |
| histidine kinase | SAMN04488505_11062 | Not Available | + | 7045787 - 7046956 | 45417.6 |
| two component transcriptional regulator, lyttr family | SAMN04488505_11063 | Not Available | + | 7046960 - 7047679 | 27384.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.