Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein yige, duf2233 family | SAMN04488505_11044 | Not Available | - | 7021139 - 7021861 | 26860.3 |
| hypothetical protein | SAMN04488505_11045 | Not Available | - | 7022063 - 7022224 | 5651.38 |
| mtn3 and saliva related transmembrane protein | SAMN04488505_11046 | Not Available | - | 7022354 - 7022617 | 9849.6 |
| alpha galactosidase a | SAMN04488505_11047 | Not Available | - | 7022650 - 7023984 | 49958.6 |
| family of unknown function | SAMN04488505_11048 | Not Available | + | 7024126 - 7025220 | 42759.6 |
| short-chain dehydrogenase | SAMN04488505_11049 | Not Available | - | 7025230 - 7025955 | 26712.7 |
| hexosaminidase | SAMN04488505_11050 | Not Available | + | 7026073 - 7028358 | 84556.4 |
| yhch/yjgk/yial family protein | SAMN04488505_11051 | Not Available | - | 7028432 - 7029028 | 22613.4 |
| pas/pac sensor hybrid histidine kinase | SAMN04488505_11052 | Not Available | + | 7029319 - 7031379 | 77397.9 |
| calcineurin-like phosphoesterase superfamily domain-containing protein | SAMN04488505_11053 | Not Available | + | 7031369 - 7032508 | 44109.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.