Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| iron complex outermembrane recepter protein | SAMN04488505_11024 | Not Available | - | 7000592 - 7003027 | 90126.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_11025 | Not Available | + | 7003203 - 7003799 | 23013.9 |
| fecr family protein | SAMN04488505_11026 | Not Available | + | 7003873 - 7005027 | 41936.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_11027 | Not Available | + | 7005174 - 7008536 | 123855.0 |
| susd family protein | SAMN04488505_11028 | Not Available | + | 7008553 - 7010067 | 56327.7 |
| pkd domain-containing protein | SAMN04488505_11029 | Not Available | + | 7010086 - 7010940 | 30670.7 |
| predicted acyltransferase | SAMN04488505_11030 | Not Available | + | 7010946 - 7012052 | 41268.4 |
| predicted dehydrogenase | SAMN04488505_11031 | Not Available | + | 7012058 - 7013434 | 50946.6 |
| hypothetical protein | SAMN04488505_11032 | Not Available | - | 7013495 - 7013926 | 16571.4 |
| hypothetical protein | SAMN04488505_11033 | Not Available | - | 7013962 - 7015032 | 41153.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.