Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| o-acetyl-adp-ribose deacetylase (regulator of rnase iii), contains macro domain | SAMN04488505_11014 | Not Available | - | 6987210 - 6987809 | 22236.2 |
| protein of unknown function duf2625 | SAMN04488505_11015 | Not Available | - | 6987882 - 6988625 | 28194.7 |
| hypothetical protein | SAMN04488505_11016 | Not Available | + | 6988949 - 6989356 | 14989.5 |
| hypothetical protein | SAMN04488505_11017 | Not Available | + | 6989474 - 6990556 | 40151.3 |
| asma family protein | SAMN04488505_11018 | Not Available | - | 6990561 - 6993791 | 121418.0 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN04488505_11019 | Not Available | - | 6993975 - 6996332 | 87916.0 |
| hypothetical protein | SAMN04488505_11020 | Not Available | - | 6996423 - 6997361 | 35565.6 |
| predicted oxidoreductase | SAMN04488505_11021 | Not Available | + | 6997524 - 6998495 | 36747.6 |
| transcriptional regulator, arac family | SAMN04488505_11022 | Not Available | - | 6998572 - 6999465 | 34558.4 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN04488505_11023 | Not Available | - | 6999603 - 7000421 | 29269.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.