Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_109247 | Not Available | - | 6956136 - 6956894 | 27343.0 |
| hypothetical protein | SAMN04488505_109248 | Not Available | + | 6957178 - 6957474 | 10978.0 |
| predicted arabinose efflux permease, mfs family | SAMN04488505_109249 | Not Available | + | 6957669 - 6958805 | 41777.9 |
| radical sam superfamily protein | SAMN04488505_109250 | Not Available | - | 6958771 - 6960066 | 48730.7 |
| hypothetical protein | SAMN04488505_109251 | Not Available | - | 6960178 - 6960765 | 22073.6 |
| agmatinase | SAMN04488505_109252 | Not Available | - | 6960869 - 6961912 | 39235.7 |
| cytochrome c-type biogenesis protein ccme | SAMN04488505_109253 | Not Available | + | 6962137 - 6962535 | 14948.3 |
| cytochrome c-type biogenesis protein ccmf | SAMN04488505_109254 | Not Available | + | 6962641 - 6965178 | 95520.8 |
| esterase/lipase | SAMN04488505_109255 | Not Available | + | 6965398 - 6966402 | 36707.4 |
| protein of unknown function | SAMN04488505_109256 | Not Available | + | 6966533 - 6967150 | 23726.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.