Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| predicted alpha-1,6-mannanase, gh76 family | SAMN04488505_109227 | Not Available | - | 6932216 - 6933379 | 42723.7 |
| suse outer membrane protein | SAMN04488505_109228 | Not Available | - | 6933454 - 6934599 | 41920.4 |
| starch-binding associating with outer membrane | SAMN04488505_109229 | Not Available | - | 6934618 - 6936240 | 60918.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_109230 | Not Available | - | 6936263 - 6939784 | 131592.0 |
| fecr family protein | SAMN04488505_109231 | Not Available | - | 6939836 - 6940882 | 39258.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_109232 | Not Available | - | 6940932 - 6941522 | 23275.1 |
| hypothetical protein | SAMN04488505_109233 | Not Available | + | 6941747 - 6941860 | 4398.36 |
| proteic killer suppression protein | SAMN04488505_109234 | Not Available | + | 6941808 - 6942092 | 11334.5 |
| addiction module antidote protein, higa family | SAMN04488505_109235 | Not Available | + | 6942116 - 6942409 | 10924.3 |
| hypothetical protein | SAMN04488505_109236 | Not Available | + | 6942983 - 6943348 | 13802.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.