Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_109197 | Not Available | + | 6896041 - 6896211 | 6220.89 |
| hypothetical protein | SAMN04488505_109198 | Not Available | + | 6896359 - 6896454 | 4001.91 |
| homogentisate 1,2-dioxygenase | SAMN04488505_109199 | Not Available | + | 6896542 - 6897699 | 44189.5 |
| predicted oxidoreductase | SAMN04488505_109200 | Not Available | + | 6897797 - 6898789 | 36901.1 |
| clan aa aspartic protease, af_0612 family | SAMN04488505_109201 | Not Available | + | 6898884 - 6899303 | 15834.3 |
| 4-hydroxyphenylpyruvate dioxygenase | SAMN04488505_109202 | Not Available | + | 6899575 - 6900702 | 42428.2 |
| l,d-transpeptidase catalytic domain | SAMN04488505_109203 | Not Available | + | 6901221 - 6901973 | 28666.6 |
| gluconate 2-dehydrogenase subunit 3 | SAMN04488505_109204 | Not Available | + | 6902229 - 6902804 | 21008.1 |
| choline dehydrogenase | SAMN04488505_109205 | Not Available | + | 6902926 - 6904623 | 63426.3 |
| choline dehydrogenase | SAMN04488505_109206 | Not Available | + | 6904816 - 6906513 | 62985.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.