Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| inorganic pyrophosphatase | SAMN04488505_109187 | Not Available | - | 6884896 - 6885435 | 20429.6 |
| protein of unknown function | SAMN04488505_109188 | Not Available | - | 6885753 - 6886217 | 17667.3 |
| phosphate starvation-inducible protein phoh | SAMN04488505_109189 | Not Available | - | 6886551 - 6887549 | 37029.9 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | SAMN04488505_109190 | Not Available | - | 6887630 - 6888085 | 15586.2 |
| response regulator receiver domain-containing protein | SAMN04488505_109191 | Not Available | + | 6888437 - 6888829 | 14710.5 |
| ribulose-phosphate 3-epimerase | SAMN04488505_109192 | Not Available | - | 6888842 - 6889501 | 23542.8 |
| tetratricopeptide repeat-containing protein | SAMN04488505_109193 | Not Available | - | 6889745 - 6890854 | 41643.4 |
| threonine synthase | SAMN04488505_109194 | Not Available | - | 6891016 - 6892323 | 48552.4 |
| homoserine kinase | SAMN04488505_109195 | Not Available | - | 6892442 - 6893368 | 32462.3 |
| aspartate kinase | SAMN04488505_109196 | Not Available | - | 6893478 - 6895928 | 89365.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.