Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488505_109177 | Not Available | + | 6872095 - 6874110 | 76072.4 |
| transglutaminase-like superfamily protein | SAMN04488505_109178 | Not Available | + | 6874113 - 6876032 | 72214.1 |
| protein of unknown function | SAMN04488505_109179 | Not Available | - | 6876213 - 6877499 | 44506.8 |
| atp-dependent clp protease atp-binding subunit clpb | SAMN04488505_109180 | Not Available | + | 6877920 - 6880535 | 98084.5 |
| trna(arg) a34 adenosine deaminase tada | SAMN04488505_109181 | Not Available | + | 6880636 - 6881115 | 17844.3 |
| putative zinc-finger | SAMN04488505_109182 | Not Available | - | 6881124 - 6881498 | 14465.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_109183 | Not Available | - | 6881501 - 6882070 | 22486.1 |
| transmembrane transcriptional regulator (anti-sigma factor rsiw) | SAMN04488505_109184 | Not Available | - | 6882214 - 6883314 | 39715.8 |
| rna polymerase sigma factor, sigma-70 family | SAMN04488505_109185 | Not Available | - | 6883318 - 6883878 | 21408.8 |
| sh3 domain-containing protein | SAMN04488505_109186 | Not Available | + | 6883984 - 6884766 | 29178.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.