Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-ribulokinase | SAMN04488505_109167 | Not Available | + | 6857886 - 6859532 | 59368.1 |
| l-ribulose 5-phosphate 4-epimerase | SAMN04488505_109168 | Not Available | + | 6859529 - 6860236 | 26494.6 |
| l-arabinose isomerase | SAMN04488505_109169 | Not Available | + | 6860322 - 6861824 | 55825.9 |
| outer membrane protein tolc | SAMN04488505_109170 | Not Available | - | 6861991 - 6863334 | 49762.2 |
| multidrug efflux pump | SAMN04488505_109171 | Not Available | - | 6863331 - 6866483 | 114309.0 |
| membrane fusion protein, multidrug efflux system | SAMN04488505_109172 | Not Available | - | 6866585 - 6867661 | 38663.5 |
| transcriptional regulator, arsr family | SAMN04488505_109173 | Not Available | - | 6867796 - 6868071 | 10613.0 |
| hypothetical protein | SAMN04488505_109174 | Not Available | - | 6868141 - 6868683 | 19577.4 |
| epoxyqueuosine reductase | SAMN04488505_109175 | Not Available | - | 6868927 - 6869853 | 35267.4 |
| transglutaminase-like enzyme, putative cysteine protease | SAMN04488505_109176 | Not Available | + | 6869972 - 6871981 | 76370.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.