Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-diphosphate-sugar epimerase | SAMN04488505_109156 | Not Available | + | 6843052 - 6843984 | 33991.8 |
| cystathionine beta-lyase | SAMN04488505_109158 | Not Available | + | 6844880 - 6846064 | 42349.9 |
| imidazolonepropionase | SAMN04488505_109159 | Not Available | + | 6846061 - 6847404 | 48779.8 |
| na+/h+-dicarboxylate symporter | SAMN04488505_109160 | Not Available | - | 6847448 - 6848689 | 43892.3 |
| lysophospholipase l1 | SAMN04488505_109161 | Not Available | + | 6848788 - 6849561 | 28084.6 |
| hypothetical protein | SAMN04488505_109162 | Not Available | + | 6849651 - 6850328 | 26104.7 |
| cobalt-zinc-cadmium resistance protein czca | SAMN04488505_109163 | Not Available | + | 6850422 - 6854831 | 161072.0 |
| membrane fusion protein, cobalt-zinc-cadmium efflux system | SAMN04488505_109164 | Not Available | + | 6854833 - 6855972 | 42433.9 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN04488505_109165 | Not Available | + | 6856071 - 6856697 | 23190.8 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04488505_109166 | Not Available | + | 6856995 - 6857699 | 27120.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.