Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin-nadp reductase | SAMN04488505_109146 | Not Available | + | 6827845 - 6829593 | 63522.5 |
| predicted dehydrogenase | SAMN04488505_109147 | Not Available | + | 6829791 - 6831188 | 52118.1 |
| oxidoreductase family, nad-binding rossmann fold | SAMN04488505_109148 | Not Available | + | 6831205 - 6832611 | 52459.0 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04488505_109149 | Not Available | - | 6832739 - 6833335 | 22031.4 |
| adp-ribosylglycohydrolase | SAMN04488505_109150 | Not Available | + | 6833496 - 6835007 | 56458.7 |
| uncharacterized sam-binding protein ycdf, duf218 family | SAMN04488505_109151 | Not Available | - | 6835019 - 6836281 | 47755.4 |
| multidrug efflux pump subunit acrb | SAMN04488505_109152 | Not Available | - | 6836414 - 6839452 | 112127.0 |
| rnd family efflux transporter, mfp subunit | SAMN04488505_109153 | Not Available | - | 6839681 - 6840745 | 37664.8 |
| outer membrane protein tolc | SAMN04488505_109154 | Not Available | - | 6840871 - 6842241 | 51554.1 |
| transcriptional regulator, tetr family | SAMN04488505_109155 | Not Available | - | 6842291 - 6842914 | 24306.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.