Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amino acid/polyamine/organocation transporter, apc superfamily | SAMN04488505_10996 | Not Available | + | 6750223 - 6751677 | 52577.4 |
| proline racemase | SAMN04488505_10997 | Not Available | + | 6751971 - 6752987 | 37101.3 |
| d-amino-acid dehydrogenase | SAMN04488505_10998 | Not Available | + | 6752997 - 6754247 | 45351.1 |
| protein of unknown function | SAMN04488505_10999 | Not Available | + | 6754264 - 6756015 | 67783.2 |
| hypothetical protein | SAMN04488505_109100 | Not Available | + | 6756071 - 6758437 | 89389.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_109101 | Not Available | + | 6758668 - 6759252 | 22764.3 |
| fecr family protein | SAMN04488505_109102 | Not Available | + | 6759444 - 6760421 | 35660.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_109103 | Not Available | + | 6760691 - 6764293 | 129756.0 |
| starch-binding associating with outer membrane | SAMN04488505_109104 | Not Available | + | 6764323 - 6765939 | 58098.5 |
| hypothetical protein | SAMN04488505_109105 | Not Available | + | 6765974 - 6766600 | 23263.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.