Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative stress-induced transcription regulator | SAMN04488505_10986 | Not Available | - | 6737722 - 6738375 | 25125.2 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN04488505_10987 | Not Available | + | 6738490 - 6739419 | 33413.5 |
| s-adenosylmethionine decarboxylase | SAMN04488505_10988 | Not Available | - | 6739416 - 6739772 | 13283.8 |
| hypothetical protein | SAMN04488505_10989 | Not Available | - | 6739885 - 6740649 | 26905.6 |
| trna u34 5-methylaminomethyl-2-thiouridine-forming methyltransferase mnmc | SAMN04488505_10990 | Not Available | + | 6740955 - 6741626 | 24596.6 |
| conserved hypothetical protein | SAMN04488505_10991 | Not Available | + | 6741795 - 6743681 | 70349.9 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN04488505_10992 | Not Available | - | 6743850 - 6746126 | 86340.0 |
| arac-type dna-binding protein | SAMN04488505_10993 | Not Available | - | 6746305 - 6747186 | 33662.6 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN04488505_10994 | Not Available | + | 6747469 - 6748404 | 33971.5 |
| nadp-dependent aldehyde dehydrogenase | SAMN04488505_10995 | Not Available | + | 6748508 - 6749962 | 51211.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.