Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN04488505_10966 | Not Available | - | 6716560 - 6717828 | 46152.1 |
| hypothetical protein | SAMN04488505_10967 | Not Available | + | 6718036 - 6719145 | 42388.7 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN04488505_10968 | Not Available | - | 6719146 - 6720870 | 64676.6 |
| hypothetical protein | SAMN04488505_10969 | Not Available | + | 6721720 - 6722373 | 23473.0 |
| sugar phosphate isomerase/epimerase | SAMN04488505_10970 | Not Available | + | 6722500 - 6723372 | 32572.1 |
| multidrug resistance efflux pump | SAMN04488505_10971 | Not Available | - | 6723345 - 6724622 | 48515.9 |
| bacteriocin-processing peptidase. cysteine peptidase. merops family c39 | SAMN04488505_10972 | Not Available | - | 6724633 - 6726807 | 82067.1 |
| hypothetical protein | SAMN04488505_10973 | Not Available | + | 6727067 - 6727240 | 6144.61 |
| lanthionine synthetase c-like protein | SAMN04488505_10974 | Not Available | + | 6727316 - 6728509 | 44256.3 |
| two component transcriptional regulator, luxr family | SAMN04488505_10975 | Not Available | + | 6728566 - 6729192 | 23099.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.