Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aldose 1-epimerase | SAMN04488505_10956 | Not Available | + | 6707923 - 6709008 | 39777.7 |
| protein phosphatase 2c | SAMN04488505_10957 | Not Available | + | 6709172 - 6709807 | 24201.5 |
| dna polymerase iii, epsilon subunit | SAMN04488505_10958 | Not Available | - | 6709797 - 6710318 | 19874.8 |
| catechol 2,3-dioxygenase | SAMN04488505_10959 | Not Available | + | 6710373 - 6710768 | 14950.8 |
| arabinan endo-1,5-alpha-l-arabinosidase | SAMN04488505_10960 | Not Available | + | 6710822 - 6711835 | 37755.8 |
| his-xaa-ser system radical sam maturase hxsc | SAMN04488505_10961 | Not Available | - | 6711861 - 6712994 | 43059.8 |
| his-xaa-ser system radical sam maturase hxsb | SAMN04488505_10962 | Not Available | - | 6712994 - 6714499 | 57793.3 |
| his-xaa-ser system protein hxsd | SAMN04488505_10963 | Not Available | - | 6714493 - 6714870 | 14790.5 |
| putative peptidoglycan binding domain-containing protein | SAMN04488505_10964 | Not Available | - | 6714851 - 6715597 | 26821.3 |
| predicted metal-dependent phosphohydrolase, hd superfamily | SAMN04488505_10965 | Not Available | + | 6715926 - 6716567 | 24990.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.