Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_10946 | Not Available | - | 6694728 - 6695012 | 10501.9 |
| hypothetical protein | SAMN04488505_10947 | Not Available | + | 6695954 - 6696250 | 10928.2 |
| hypothetical protein | SAMN04488505_10948 | Not Available | + | 6696299 - 6696643 | 13542.2 |
| nacht domain-containing protein | SAMN04488505_10949 | Not Available | + | 6696809 - 6698581 | 69718.9 |
| transposase | SAMN04488505_10950 | Not Available | + | 6698951 - 6699646 | 27261.8 |
| protein of unknown function | SAMN04488505_10951 | Not Available | - | 6699758 - 6699973 | 7912.32 |
| transcriptional regulator, arac family | SAMN04488505_10952 | Not Available | - | 6700005 - 6700910 | 35463.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_10953 | Not Available | + | 6701078 - 6704116 | 112498.0 |
| starch-binding associating with outer membrane | SAMN04488505_10954 | Not Available | + | 6704135 - 6705658 | 56717.4 |
| hypothetical protein | SAMN04488505_10955 | Not Available | + | 6705747 - 6707930 | 80697.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.