Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysophospholipase l1 | SAMN04488505_10936 | Not Available | + | 6685815 - 6687014 | 44970.7 |
| arac-like ligand binding domain-containing protein | SAMN04488505_10937 | Not Available | + | 6687038 - 6687937 | 34742.4 |
| l-fuconate dehydratase | SAMN04488505_10938 | Not Available | + | 6688025 - 6689254 | 45745.7 |
| solute:na+ symporter, sss family | SAMN04488505_10939 | Not Available | + | 6689251 - 6690897 | 59453.5 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488505_10940 | Not Available | + | 6691162 - 6691959 | 28721.4 |
| cubico group peptidase, beta-lactamase class c family | SAMN04488505_10941 | Not Available | - | 6691967 - 6693145 | 43921.7 |
| helix-turn-helix | SAMN04488505_10942 | Not Available | - | 6693235 - 6693468 | 8621.46 |
| helix-turn-helix domain-containing protein | SAMN04488505_10943 | Not Available | - | 6693494 - 6693808 | 11951.5 |
| hypothetical protein | SAMN04488505_10944 | Not Available | + | 6693915 - 6694199 | 10785.8 |
| hypothetical protein | SAMN04488505_10945 | Not Available | + | 6694297 - 6694731 | 16395.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.