Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| integral membrane protein | SAMN04488505_10926 | Not Available | - | 6668753 - 6669061 | 11554.9 |
| hypothetical protein | SAMN04488505_10927 | Not Available | - | 6669064 - 6669528 | 17649.9 |
| arac-type dna-binding protein | SAMN04488505_10928 | Not Available | - | 6669589 - 6670506 | 34677.1 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488505_10929 | Not Available | - | 6670622 - 6674215 | 130627.0 |
| arac-type dna-binding protein | SAMN04488505_10930 | Not Available | + | 6674422 - 6675291 | 33167.4 |
| short-chain dehydrogenase | SAMN04488505_10931 | Not Available | + | 6675357 - 6676079 | 25460.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_10932 | Not Available | + | 6676391 - 6679504 | 115228.0 |
| starch-binding associating with outer membrane | SAMN04488505_10933 | Not Available | + | 6679509 - 6681026 | 56482.9 |
| alpha-l-fucosidase 2 | SAMN04488505_10934 | Not Available | + | 6681254 - 6683581 | 85699.5 |
| alpha-galactosidase | SAMN04488505_10935 | Not Available | + | 6683625 - 6685811 | 83052.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.