Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_10916 | Not Available | - | 6654657 - 6657722 | 112831.0 |
| glycerophosphoryl diester phosphodiesterase | SAMN04488505_10917 | Not Available | - | 6657882 - 6658811 | 34890.9 |
| glycerol uptake facilitator protein | SAMN04488505_10918 | Not Available | - | 6658996 - 6659724 | 25647.8 |
| glycerol kinase | SAMN04488505_10919 | Not Available | - | 6659757 - 6661241 | 53591.2 |
| glycerol-3-phosphate dehydrogenase | SAMN04488505_10920 | Not Available | - | 6661311 - 6662909 | 58285.1 |
| transcriptional regulator, deor family | SAMN04488505_10921 | Not Available | + | 6663261 - 6664031 | 28144.3 |
| phnb protein | SAMN04488505_10922 | Not Available | + | 6664127 - 6664549 | 15713.6 |
| hypothetical protein | SAMN04488505_10923 | Not Available | - | 6664672 - 6667038 | 87379.0 |
| sugar or nucleoside kinase, ribokinase family | SAMN04488505_10924 | Not Available | + | 6667229 - 6668122 | 32792.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_10925 | Not Available | + | 6668346 - 6668756 | 15034.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.