Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| response regulator receiver domain-containing protein | SAMN04488505_1096 | Not Available | + | 6645823 - 6646233 | 15509.7 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN04488505_1097 | Not Available | - | 6646293 - 6647150 | 31092.8 |
| uncharacterized membrane protein | SAMN04488505_1098 | Not Available | + | 6647332 - 6647835 | 18398.1 |
| conserved hypothetical protein, hne_0200 family | SAMN04488505_1099 | Not Available | + | 6647856 - 6648818 | 35893.2 |
| phnb protein | SAMN04488505_10910 | Not Available | + | 6648908 - 6649324 | 15106.0 |
| dihydrofolate reductase | SAMN04488505_10911 | Not Available | + | 6649569 - 6650120 | 20518.5 |
| polyketide cyclase / dehydrase and lipid transport | SAMN04488505_10912 | Not Available | + | 6650156 - 6650692 | 20233.9 |
| phnb protein | SAMN04488505_10913 | Not Available | + | 6650722 - 6651147 | 15642.6 |
| type i phosphodiesterase / nucleotide pyrophosphatase | SAMN04488505_10914 | Not Available | - | 6651232 - 6652863 | 59771.1 |
| starch-binding associating with outer membrane | SAMN04488505_10915 | Not Available | - | 6653063 - 6654637 | 58158.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.