Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cold shock protein, cspa family | SAMN04488505_108242 | Not Available | + | 6604868 - 6605311 | 16785.2 |
| rna recognition motif. (a.k.a. rrm, rbd, or rnp domain) | SAMN04488505_108243 | Not Available | + | 6605358 - 6605594 | 8884.79 |
| rna recognition motif. (a.k.a. rrm, rbd, or rnp domain) | SAMN04488505_108244 | Not Available | + | 6605624 - 6605896 | 10184.2 |
| cold shock protein (beta-ribbon, cspa family) | SAMN04488505_108245 | Not Available | + | 6605907 - 6606098 | 6847.04 |
| signal transduction histidine kinase | SAMN04488505_108246 | Not Available | - | 6606626 - 6607930 | 50360.2 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN04488505_108247 | Not Available | - | 6607927 - 6608601 | 25666.2 |
| transcription antitermination factor nusg | SAMN04488505_108248 | Not Available | + | 6609898 - 6610425 | 20009.2 |
| thioesterase domain-containing protein | SAMN04488505_108249 | Not Available | + | 6610447 - 6611292 | 31418.5 |
| cellobiose phosphorylase | SAMN04488505_108250 | Not Available | + | 6611285 - 6619618 | 308612.0 |
| atp-binding cassette, subfamily b | SAMN04488505_108251 | Not Available | + | 6619631 - 6621832 | 83454.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.