Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_108212 | Not Available | + | 6567307 - 6570639 | 120811.0 |
| starch-binding associating with outer membrane | SAMN04488505_108213 | Not Available | + | 6570651 - 6572300 | 60572.5 |
| predicted glycosyl hydrolase, gh43/duf377 family | SAMN04488505_108214 | Not Available | + | 6572378 - 6573535 | 43182.4 |
| planctomycete cytochrome c | SAMN04488505_108215 | Not Available | + | 6573827 - 6576145 | 88224.5 |
| protein of unknown function | SAMN04488505_108216 | Not Available | + | 6576175 - 6577629 | 53867.3 |
| uncharacterized membrane protein | SAMN04488505_108217 | Not Available | + | 6577664 - 6579838 | 78970.4 |
| cubico group peptidase, beta-lactamase class c family | SAMN04488505_108218 | Not Available | - | 6580063 - 6581079 | 37664.5 |
| hypothetical protein | SAMN04488505_108219 | Not Available | - | 6581677 - 6582624 | 36729.7 |
| hypothetical protein | SAMN04488505_108220 | Not Available | + | 6582945 - 6583163 | 7990.91 |
| hypothetical protein | SAMN04488505_108221 | Not Available | - | 6583256 - 6584050 | 30594.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.