Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| galactonate dehydratase | SAMN04488505_108182 | Not Available | - | 6528740 - 6530020 | 47072.7 |
| regulator of rnase e activity rraa | SAMN04488505_108183 | Not Available | - | 6530039 - 6530962 | 34788.4 |
| gluconate kinase, fggy family | SAMN04488505_108184 | Not Available | - | 6530997 - 6532553 | 57623.0 |
| arac-type dna-binding protein | SAMN04488505_108185 | Not Available | - | 6532565 - 6533452 | 33505.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_108186 | Not Available | + | 6533615 - 6536791 | 116082.0 |
| starch-binding associating with outer membrane | SAMN04488505_108187 | Not Available | + | 6536803 - 6538344 | 55377.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_108188 | Not Available | + | 6538651 - 6539262 | 23592.6 |
| fecr family protein | SAMN04488505_108189 | Not Available | + | 6539326 - 6540525 | 43499.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_108190 | Not Available | + | 6540590 - 6543949 | 124175.0 |
| starch-binding associating with outer membrane | SAMN04488505_108191 | Not Available | + | 6543982 - 6544515 | 20553.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.