Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | SAMN04488505_108172 | Not Available | + | 6491749 - 6494835 | 116840.0 |
| two component transcriptional regulator, luxr family | SAMN04488505_108173 | Not Available | - | 6494832 - 6495473 | 23920.4 |
| gliding motility-associated c-terminal domain-containing protein | SAMN04488505_108174 | Not Available | + | 6495957 - 6520742 | 847013.0 |
| type ix secretion system membrane protein, porp/sprf family | SAMN04488505_108175 | Not Available | + | 6520783 - 6521775 | 36901.1 |
| wd40-like beta propeller repeat | SAMN04488505_108176 | Not Available | + | 6521794 - 6523617 | 67797.9 |
| hypothetical protein | SAMN04488505_108177 | Not Available | - | 6523669 - 6524724 | 40057.0 |
| hypothetical protein | SAMN04488505_108178 | Not Available | + | 6524904 - 6526229 | 48859.2 |
| atp-dependent rna helicase rhle | SAMN04488505_108179 | Not Available | - | 6526235 - 6527566 | 49740.9 |
| hypothetical protein | SAMN04488505_108180 | Not Available | + | 6527582 - 6527692 | 3947.94 |
| right handed beta helix region | SAMN04488505_108181 | Not Available | - | 6527699 - 6528589 | 30646.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.