Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-fucosidase | SAMN04488505_108162 | Not Available | + | 6479950 - 6481323 | 50828.8 |
| glycosyl hydrolases family 28 | SAMN04488505_108163 | Not Available | + | 6481498 - 6483171 | 59666.0 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN04488505_108164 | Not Available | - | 6483161 - 6484264 | 41644.1 |
| putative abc transport system permease protein | SAMN04488505_108165 | Not Available | - | 6484360 - 6486762 | 89560.0 |
| methyltransferase domain-containing protein | SAMN04488505_108166 | Not Available | + | 6486964 - 6487599 | 23744.4 |
| lactoylglutathione lyase | SAMN04488505_108167 | Not Available | + | 6487724 - 6488128 | 15280.8 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488505_108168 | Not Available | + | 6488278 - 6489045 | 27215.6 |
| helix-turn-helix domain-containing protein | SAMN04488505_108169 | Not Available | + | 6489137 - 6490030 | 34405.6 |
| hypothetical protein | SAMN04488505_108170 | Not Available | - | 6490062 - 6490604 | 20060.6 |
| protein of unknown function | SAMN04488505_108171 | Not Available | - | 6490792 - 6491598 | 30738.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.