Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha-glucosidase | SAMN04488505_108152 | Not Available | + | 6470639 - 6472543 | 72081.0 |
| hypothetical protein | SAMN04488505_108153 | Not Available | + | 6472658 - 6473062 | 15366.0 |
| hypothetical protein | SAMN04488505_108154 | Not Available | - | 6473072 - 6473452 | 14285.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_108155 | Not Available | - | 6473469 - 6474029 | 21491.9 |
| hypothetical protein | SAMN04488505_108156 | Not Available | + | 6474179 - 6474529 | 12629.8 |
| hypothetical protein | SAMN04488505_108157 | Not Available | + | 6474560 - 6475483 | 34485.8 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488505_108158 | Not Available | + | 6475549 - 6476130 | 22686.0 |
| predicted membrane protein | SAMN04488505_108159 | Not Available | + | 6476175 - 6476996 | 30983.9 |
| hypothetical protein | SAMN04488505_108160 | Not Available | + | 6477042 - 6479111 | 77761.3 |
| cupin domain-containing protein | SAMN04488505_108161 | Not Available | + | 6479190 - 6479639 | 16600.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.