Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duplicated orphan permease | SAMN04488505_101317 | Not Available | - | 416622 - 419042 | 89956.7 |
| hypothetical protein | SAMN04488505_101318 | Not Available | - | 419267 - 420085 | 30656.3 |
| hypothetical protein | SAMN04488505_101319 | Not Available | + | 420176 - 420889 | 27786.8 |
| alginate lyase | SAMN04488505_101320 | Not Available | - | 420980 - 422143 | 42514.0 |
| nucleoside-diphosphate-sugar epimerase | SAMN04488505_101321 | Not Available | + | 422504 - 423490 | 36722.8 |
| dihydrofolate reductase | SAMN04488505_101322 | Not Available | + | 423577 - 424233 | 23631.5 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN04488505_101323 | Not Available | - | 424278 - 425129 | 30129.4 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN04488505_101324 | Not Available | - | 425176 - 426069 | 32042.5 |
| transcriptional regulator, hxlr family | SAMN04488505_101325 | Not Available | + | 426145 - 426546 | 15169.7 |
| acetyltransferase (gnat) domain-containing protein | SAMN04488505_101326 | Not Available | - | 426552 - 426950 | 15143.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.