Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN04488505_101217 | Not Available | - | 283135 - 284520 | 51013.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_101218 | Not Available | - | 284539 - 287607 | 111964.0 |
| dna-binding transcriptional regulator, lysr family | SAMN04488505_101219 | Not Available | - | 287917 - 288825 | 34655.1 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488505_101220 | Not Available | + | 288944 - 289738 | 28288.1 |
| cubico group peptidase, beta-lactamase class c family | SAMN04488505_101221 | Not Available | + | 289896 - 291173 | 47254.2 |
| outer membrane protein, cobalt-zinc-cadmium efflux system | SAMN04488505_101222 | Not Available | + | 291626 - 292879 | 46893.7 |
| rnd family efflux transporter, mfp subunit | SAMN04488505_101223 | Not Available | + | 292879 - 293904 | 37389.8 |
| hypothetical protein | SAMN04488505_101224 | Not Available | + | 293930 - 294232 | 11665.1 |
| cobalt-zinc-cadmium resistance protein czca | SAMN04488505_101225 | Not Available | + | 294252 - 297410 | 115022.0 |
| hypothetical protein | SAMN04488505_101226 | Not Available | + | 297673 - 297885 | 7673.71 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.