Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04488505_102202 | Not Available | + | 2041386 - 2041622 | 8546.76 |
| hypothetical protein | SAMN04488505_102203 | Not Available | + | 2041660 - 2042067 | 15803.6 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488505_102204 | Not Available | + | 2042103 - 2042864 | 26801.2 |
| crp/fnr family transcriptional regulator, anaerobic regulatory protein | SAMN04488505_102205 | Not Available | - | 2042867 - 2043520 | 25583.8 |
| hypothetical protein | SAMN04488505_102206 | Not Available | + | 2043648 - 2044217 | 20607.8 |
| hypothetical protein | SAMN04488505_102207 | Not Available | + | 2044228 - 2044713 | 18236.6 |
| glyoxylase, beta-lactamase superfamily ii | SAMN04488505_102208 | Not Available | - | 2044794 - 2046212 | 51772.9 |
| hypothetical protein | SAMN04488505_102209 | Not Available | - | 2046250 - 2047047 | 28126.1 |
| restriction endonuclease | SAMN04488505_102210 | Not Available | - | 2047104 - 2047976 | 32136.9 |
| polysaccharide deacetylase | SAMN04488505_102211 | Not Available | + | 2048131 - 2048868 | 27396.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.