Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 6-phosphofructokinase 2 | SAMN04488505_102192 | Not Available | + | 2025853 - 2026779 | 32865.0 |
| murein l,d-transpeptidase ycbb/ykud | SAMN04488505_102193 | Not Available | + | 2026776 - 2028272 | 55678.5 |
| phosphorylase / glycogen(starch) synthase | SAMN04488505_102194 | Not Available | - | 2028286 - 2032452 | 155554.0 |
| glycogen debranching enzyme, putative | SAMN04488505_102195 | Not Available | - | 2032473 - 2034452 | 74201.6 |
| hypothetical protein | SAMN04488505_102196 | Not Available | - | 2034508 - 2034603 | 3549.27 |
| hypothetical protein | SAMN04488505_102197 | Not Available | + | 2034734 - 2035564 | 31572.9 |
| zn-dependent protease (includes spoivfb) | SAMN04488505_102198 | Not Available | + | 2035595 - 2036722 | 41301.3 |
| hypothetical protein | SAMN04488505_102199 | Not Available | + | 2036773 - 2037594 | 30745.7 |
| ca2+-transporting atpase | SAMN04488505_102200 | Not Available | + | 2037601 - 2040174 | 92861.3 |
| alcohol dehydrogenase, propanol-preferring | SAMN04488505_102201 | Not Available | - | 2040171 - 2041178 | 35698.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.