Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein family protein | SAMN04488505_102182 | Not Available | + | 2016618 - 2017454 | 31792.3 |
| hypothetical protein | SAMN04488505_102183 | Not Available | + | 2017473 - 2018168 | 26917.5 |
| dienelactone hydrolase | SAMN04488505_102184 | Not Available | + | 2018328 - 2019026 | 26026.5 |
| hypothetical protein | SAMN04488505_102185 | Not Available | + | 2019059 - 2019571 | 18670.6 |
| lipoprotein-releasing system atp-binding protein | SAMN04488505_102186 | Not Available | - | 2019646 - 2020320 | 24908.2 |
| lipoprotein-releasing system permease protein | SAMN04488505_102187 | Not Available | - | 2020331 - 2021593 | 46432.8 |
| multidrug efflux pump subunit acra (membrane-fusion protein) | SAMN04488505_102188 | Not Available | - | 2021600 - 2022715 | 41422.7 |
| serine protease, s1-c subfamily, contains c-terminal pdz domain | SAMN04488505_102189 | Not Available | + | 2022917 - 2024422 | 54008.6 |
| universal stress protein family protein | SAMN04488505_102190 | Not Available | + | 2024443 - 2025279 | 31409.7 |
| protoporphyrinogen ix oxidase, menaquinone-dependent (flavodoxin domain) | SAMN04488505_102191 | Not Available | + | 2025291 - 2025845 | 20980.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.