Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488505_102102 | Not Available | + | 1914305 - 1915336 | 36936.0 |
| transcriptional regulator, arac family | SAMN04488505_102103 | Not Available | + | 1915449 - 1916273 | 32100.0 |
| morn repeat variant | SAMN04488505_102104 | Not Available | + | 1916457 - 1917029 | 21543.5 |
| signal transduction histidine kinase | SAMN04488505_102105 | Not Available | + | 1917284 - 1921372 | 154256.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_102106 | Not Available | + | 1921553 - 1924855 | 120067.0 |
| starch-binding associating with outer membrane | SAMN04488505_102107 | Not Available | + | 1924877 - 1926529 | 61563.6 |
| hypothetical protein | SAMN04488505_102108 | Not Available | + | 1926550 - 1927809 | 45220.5 |
| hypothetical protein | SAMN04488505_102109 | Not Available | + | 1927847 - 1929577 | 61850.5 |
| predicted oxidoreductase | SAMN04488505_102110 | Not Available | - | 1929850 - 1930830 | 36462.9 |
| arac-type dna-binding protein | SAMN04488505_102111 | Not Available | - | 1930963 - 1931844 | 33018.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.