Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramic acid 6-phosphate etherase | SAMN04488505_10282 | Not Available | + | 1888997 - 1889809 | 29157.2 |
| glucose/galactose transporter | SAMN04488505_10283 | Not Available | + | 1889819 - 1891084 | 45170.7 |
| mfs transporter, acs family, hexuronate transporter | SAMN04488505_10284 | Not Available | + | 1891091 - 1892371 | 46951.0 |
| predicted pyrophosphatase or phosphodiesterase, alkp superfamily | SAMN04488505_10285 | Not Available | + | 1892477 - 1893835 | 49355.3 |
| abc-type antimicrobial peptide transport system, permease component | SAMN04488505_10286 | Not Available | - | 1893950 - 1896376 | 89831.5 |
| hypothetical protein | SAMN04488505_10287 | Not Available | - | 1896717 - 1897367 | 24871.8 |
| hypothetical protein | SAMN04488505_10288 | Not Available | - | 1897511 - 1897708 | 7598.82 |
| adp-ribose pyrophosphatase yjhb, nudix family | SAMN04488505_10289 | Not Available | + | 1897789 - 1898196 | 15084.0 |
| nramp (natural resistance-associated macrophage protein) metal ion transporters | SAMN04488505_10290 | Not Available | - | 1898203 - 1899519 | 48428.9 |
| arac-type dna-binding protein | SAMN04488505_10291 | Not Available | + | 1899731 - 1900504 | 28970.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.