Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polygalacturonase | SAMN04488505_10272 | Not Available | + | 1873498 - 1875042 | 56153.7 |
| rhamnogalacturonyl hydrolase yesr | SAMN04488505_10273 | Not Available | + | 1875026 - 1876696 | 62968.1 |
| cardb protein | SAMN04488505_10274 | Not Available | + | 1876736 - 1879531 | 105129.0 |
| hypothetical protein | SAMN04488505_10275 | Not Available | + | 1879539 - 1879691 | 6198.51 |
| glycosyl hydrolase family 20, catalytic domain | SAMN04488505_10276 | Not Available | + | 1879723 - 1882254 | 94831.7 |
| hypothetical protein | SAMN04488505_10277 | Not Available | + | 1882241 - 1883494 | 46946.6 |
| tonb-dependent receptor | SAMN04488505_10278 | Not Available | + | 1883533 - 1886376 | 104983.0 |
| glucosamine-6-phosphate deaminase | SAMN04488505_10279 | Not Available | + | 1886416 - 1887192 | 28819.3 |
| phytanoyl-coa dioxygenase (phyh) | SAMN04488505_10280 | Not Available | + | 1887245 - 1888141 | 34020.0 |
| sugar phosphate isomerase/epimerase | SAMN04488505_10281 | Not Available | + | 1888173 - 1889000 | 30823.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.