Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide deacetylase | SAMN04488505_10232 | Not Available | - | 1831193 - 1831984 | 30700.2 |
| glycosyl transferase family 2 | SAMN04488505_10233 | Not Available | - | 1831986 - 1832747 | 29032.2 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04488505_10234 | Not Available | - | 1833074 - 1833763 | 24774.6 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04488505_10235 | Not Available | - | 1834051 - 1834728 | 24479.4 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488505_10236 | Not Available | + | 1835271 - 1838675 | 120718.0 |
| hypothetical protein | SAMN04488505_10237 | Not Available | + | 1838783 - 1839262 | 15754.5 |
| stress responsive a/b barrel domain | SAMN04488505_10238 | Not Available | + | 1839370 - 1839780 | 14899.9 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase large subunit | SAMN04488505_10239 | Not Available | + | 1840001 - 1841407 | 50406.4 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase small subunit | SAMN04488505_10240 | Not Available | + | 1841465 - 1842061 | 22367.4 |
| d-citramalate synthase | SAMN04488505_10241 | Not Available | + | 1842080 - 1843603 | 56646.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.