Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488505_1011449 | Not Available | - | 1780575 - 1781552 | 37083.3 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04488505_1011450 | Not Available | + | 1781832 - 1782626 | 29574.1 |
| uncharacterized membrane protein | SAMN04488505_1011451 | Not Available | - | 1782718 - 1783344 | 23593.4 |
| transcriptional regulator, tetr family | SAMN04488505_1011452 | Not Available | + | 1784008 - 1784628 | 24397.7 |
| outer membrane protein tolc | SAMN04488505_1011453 | Not Available | + | 1784639 - 1786012 | 50751.8 |
| rnd family efflux transporter, mfp subunit | SAMN04488505_1011454 | Not Available | + | 1786050 - 1787165 | 40402.8 |
| multidrug efflux pump subunit acrb | SAMN04488505_1011455 | Not Available | + | 1787192 - 1790755 | 131872.0 |
| tigr00266 family protein | SAMN04488505_1011456 | Not Available | + | 1790923 - 1791705 | 28143.4 |
| hypothetical protein | SAMN04488505_1011457 | Not Available | + | 1792291 - 1792607 | 11715.9 |
| hypothetical protein | SAMN04488505_1021 | Not Available | - | 1792608 - 1792882 | 10243.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.