Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| isoquinoline 1-oxidoreductase, beta subunit | SAMN04488505_1011429 | Not Available | + | 1752742 - 1754901 | 79448.5 |
| hypothetical protein | SAMN04488505_1011430 | Not Available | + | 1755169 - 1756596 | 54150.8 |
| rna polymerase sigma factor, sigma-70 family | SAMN04488505_1011431 | Not Available | + | 1757387 - 1758202 | 32610.7 |
| protein of unknown function duf262 | SAMN04488505_1011432 | Not Available | + | 1758231 - 1760564 | 91461.4 |
| hypothetical protein | SAMN04488505_1011433 | Not Available | + | 1760652 - 1762583 | 74380.0 |
| hypothetical protein | SAMN04488505_1011434 | Not Available | - | 1762578 - 1763360 | 29320.0 |
| starch-binding associating with outer membrane | SAMN04488505_1011435 | Not Available | - | 1763526 - 1765061 | 56527.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_1011436 | Not Available | - | 1765080 - 1768181 | 113730.0 |
| hypothetical protein | SAMN04488505_1011437 | Not Available | + | 1768698 - 1769684 | 36206.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_1011438 | Not Available | + | 1769789 - 1770631 | 31974.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.