Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488505_1011409 | Not Available | + | 1723872 - 1726904 | 110438.0 |
| starch-binding associating with outer membrane | SAMN04488505_1011410 | Not Available | + | 1726939 - 1728747 | 67351.0 |
| glycosyl-hydrolase 97 c-terminal, oligomerisation | SAMN04488505_1011411 | Not Available | + | 1728768 - 1730879 | 79123.6 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488505_1011412 | Not Available | + | 1730929 - 1734948 | 142541.0 |
| catechol 2,3-dioxygenase | SAMN04488505_1011413 | Not Available | + | 1735253 - 1735696 | 16744.6 |
| probable oxidoreductase, llm family | SAMN04488505_1011414 | Not Available | + | 1735773 - 1736807 | 37972.7 |
| enoyl-[acyl-carrier-protein] reductase | SAMN04488505_1011415 | Not Available | + | 1736903 - 1737706 | 27417.5 |
| gluconolactonase | SAMN04488505_1011416 | Not Available | + | 1737737 - 1738630 | 32686.9 |
| hypothetical protein | SAMN04488505_1011417 | Not Available | + | 1738710 - 1740611 | 70374.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_1011418 | Not Available | + | 1740711 - 1741265 | 20830.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.