Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-seryl-trna(ser) seleniumtransferase | SAMN04488505_1011379 | Not Available | + | 1691364 - 1692593 | 44296.2 |
| dihydroorotase | SAMN04488505_1011380 | Not Available | + | 1692613 - 1693914 | 46916.6 |
| regulator of rnase e activity rraa | SAMN04488505_1011381 | Not Available | + | 1693936 - 1694871 | 34749.9 |
| bile acid:na+ symporter, bass family | SAMN04488505_1011382 | Not Available | + | 1694890 - 1696017 | 40625.2 |
| secreted repeat of unknown function | SAMN04488505_1011383 | Not Available | + | 1696433 - 1697287 | 31144.7 |
| transcriptional regulator, tetr family | SAMN04488505_1011384 | Not Available | + | 1697534 - 1698124 | 22673.6 |
| hypothetical protein | SAMN04488505_1011385 | Not Available | + | 1698179 - 1698424 | 9453.63 |
| predicted arabinose efflux permease, mfs family | SAMN04488505_1011386 | Not Available | + | 1698445 - 1699722 | 45529.1 |
| chitosanase | SAMN04488505_1011387 | Not Available | + | 1699823 - 1700497 | 24969.9 |
| lysophospholipase l1 | SAMN04488505_1011388 | Not Available | + | 1700517 - 1701755 | 45623.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.