Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_1011288 | Not Available | - | 1586812 - 1587306 | 19670.2 |
| protein involved in polysaccharide export, contains slbb domain of the beta-grasp fold | SAMN04488505_1011289 | Not Available | + | 1587642 - 1590140 | 92842.3 |
| udp-n-acetyl-d-galactosamine dehydrogenase | SAMN04488505_1011290 | Not Available | + | 1590155 - 1591447 | 47171.1 |
| chain length determinant protein | SAMN04488505_1011291 | Not Available | + | 1591474 - 1592553 | 40239.7 |
| nad dependent epimerase/dehydratase, llpsf_edh_00030 family | SAMN04488505_1011292 | Not Available | + | 1592578 - 1593576 | 37178.5 |
| aminotransferase, llpsf_nht_00031 family | SAMN04488505_1011293 | Not Available | + | 1593591 - 1594742 | 42713.1 |
| sugar o-acyltransferase, sialic acid o-acetyltransferase neud family | SAMN04488505_1011294 | Not Available | + | 1594746 - 1595387 | 22675.7 |
| n-acetylneuraminate synthase | SAMN04488505_1011295 | Not Available | + | 1595389 - 1596393 | 36498.4 |
| gdp/udp-n,n'-diacetylbacillosamine 2-epimerase (hydrolysing) | SAMN04488505_1011296 | Not Available | + | 1596390 - 1597559 | 43041.1 |
| cbs domain-containing protein | SAMN04488505_1011297 | Not Available | + | 1597628 - 1598671 | 39331.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.