Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 40-residue yvtn family beta-propeller repeat-containing protein | SAMN04488505_1011278 | Not Available | + | 1572632 - 1575070 | 89502.7 |
| hypothetical protein | SAMN04488505_1011279 | Not Available | + | 1575129 - 1576562 | 54200.4 |
| muts domain iii | SAMN04488505_1011280 | Not Available | + | 1576655 - 1578433 | 67349.0 |
| dna repair photolyase | SAMN04488505_1011281 | Not Available | + | 1578540 - 1579625 | 41686.3 |
| dinb superfamily protein | SAMN04488505_1011282 | Not Available | + | 1580257 - 1580829 | 22366.1 |
| atpase family associated with various cellular activities (aaa) | SAMN04488505_1011283 | Not Available | + | 1581564 - 1582625 | 40183.6 |
| pp_01266 | SAMN04488505_1011284 | Not Available | + | 1582645 - 1584054 | Not Available |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN04488505_1011285 | Not Available | + | 1584307 - 1585506 | 47177.1 |
| Trna-pseudo | Not Available | Not Available | + | 1585513 - 1585583 | Not Available |
| predicted acyltransferase | SAMN04488505_1011287 | Not Available | - | 1585688 - 1586812 | 42624.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.