Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoglutarate ferredoxin oxidoreductase subunit beta | SAMN04488505_1011228 | Not Available | - | 1507559 - 1508593 | 38342.8 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN04488505_1011229 | Not Available | - | 1508727 - 1509071 | 13075.8 |
| n-acetylmuramoyl-l-alanine amidase | SAMN04488505_1011230 | Not Available | - | 1509507 - 1511252 | 64964.8 |
| hypothetical protein | SAMN04488505_1011231 | Not Available | - | 1511389 - 1513182 | 65765.2 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04488505_1011232 | Not Available | + | 1513367 - 1514167 | 30324.7 |
| peptidase family m23 | SAMN04488505_1011233 | Not Available | + | 1514235 - 1514789 | 19396.1 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN04488505_1011234 | Not Available | + | 1514924 - 1516066 | 43428.6 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN04488505_1011235 | Not Available | + | 1516486 - 1517322 | 29891.7 |
| helix-turn-helix domain-containing protein | SAMN04488505_1011236 | Not Available | + | 1517483 - 1518400 | 35322.0 |
| hypothetical protein | SAMN04488505_1011237 | Not Available | + | 1518498 - 1519301 | 29158.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.