Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bon domain-containing protein | SAMN04488505_1011158 | Not Available | + | 1424770 - 1425255 | 17074.8 |
| lysm domain-containing protein | SAMN04488505_1011159 | Not Available | + | 1425275 - 1425658 | 13996.5 |
| kdo2-lipid iv(a) lauroyltransferase | SAMN04488505_1011160 | Not Available | - | 1425655 - 1426515 | 34084.7 |
| l-aspartate oxidase | SAMN04488505_1011161 | Not Available | - | 1426532 - 1428127 | 59773.6 |
| uncharacterized membrane protein yhhn | SAMN04488505_1011162 | Not Available | - | 1428216 - 1428890 | 25588.4 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN04488505_1011163 | Not Available | - | 1428942 - 1430330 | 52352.6 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN04488505_1011164 | Not Available | - | 1430368 - 1431714 | 50979.4 |
| hlyd family secretion protein | SAMN04488505_1011165 | Not Available | + | 1431973 - 1433229 | 47537.3 |
| putative abc transport system atp-binding protein | SAMN04488505_1011166 | Not Available | + | 1433290 - 1433979 | 25728.1 |
| putative abc transport system permease protein | SAMN04488505_1011167 | Not Available | + | 1433972 - 1436404 | 91179.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.