Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein hu-beta | SAMN04488505_1011148 | Not Available | + | 1414706 - 1414993 | 10654.2 |
| tpr repeat-containing protein | SAMN04488505_1011149 | Not Available | + | 1415018 - 1415866 | 31127.8 |
| ribonuclease g | SAMN04488505_1011150 | Not Available | + | 1416349 - 1417899 | 58328.6 |
| cupin domain protein | SAMN04488505_1011151 | Not Available | - | 1418054 - 1418380 | 12004.4 |
| murein l,d-transpeptidase ycbb/ykud | SAMN04488505_1011152 | Not Available | + | 1418533 - 1420188 | 62538.2 |
| 2-iminobutanoate/2-iminopropanoate deaminase | SAMN04488505_1011153 | Not Available | - | 1420307 - 1420687 | 13926.8 |
| 3-hydroxybutyryl-coa dehydrogenase | SAMN04488505_1011154 | Not Available | + | 1420809 - 1421471 | 24442.3 |
| trna threonylcarbamoyladenosine biosynthesis protein tsab | SAMN04488505_1011155 | Not Available | + | 1421477 - 1422154 | 24825.9 |
| dna-binding transcriptional regulator, arsr family | SAMN04488505_1011156 | Not Available | + | 1422475 - 1422834 | 13700.0 |
| glyoxylase, beta-lactamase superfamily ii | SAMN04488505_1011157 | Not Available | + | 1423035 - 1424438 | 51339.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.