Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga rupis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga rupis
Accession NumberFOBB00000000.1
Gene Summary
Adenine Count
2199289 bp
Thymine Count
2199880 bp
Guanine Count
1998172 bp
Cytosine Count
1989318 bp
Genome Length
8387119 bp
Protein-coding Genes
6501 genes
Non-Coding Genes
64 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylaminoimidazolecarboxamide formyltransferase / imp cyclohydrolase | SAMN04488505_1011138 | Not Available | + | 1404383 - 1405897 | 55583.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488505_1011139 | Not Available | + | 1406021 - 1406602 | 22642.3 |
| lysophospholipase l1 | SAMN04488505_1011140 | Not Available | + | 1406595 - 1408025 | 52385.3 |
| proteolipid membrane potential modulator | SAMN04488505_1011141 | Not Available | - | 1408129 - 1408329 | 7568.79 |
| l-lactate dehydrogenase complex protein lldf | SAMN04488505_1011142 | Not Available | - | 1408340 - 1409719 | 51711.9 |
| protein of unknown function | SAMN04488505_1011143 | Not Available | - | 1409881 - 1410483 | 22734.5 |
| gliding motility-associated lipoprotein gldd | SAMN04488505_1011144 | Not Available | - | 1410575 - 1411153 | 22373.3 |
| protein involved in gliding motility glde | SAMN04488505_1011145 | Not Available | - | 1411187 - 1412548 | 50842.8 |
| single-strand binding protein | SAMN04488505_1011146 | Not Available | - | 1412702 - 1413157 | 16923.1 |
| a/g-specific dna-adenine glycosylase | SAMN04488505_1011147 | Not Available | - | 1413255 - 1414319 | 40489.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.